BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B11LP1|AL425079
(742 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1442 0.0
>3x_Contig1604
Length = 15703
Score = 1442 bits (724), Expect = 0.0
Identities = 735/742 (99%)
Strand = Plus / Plus
Query: 1 atccatgtataccggtttttgtaatgaacgggtacaccactctctctaagaacatctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 atccatgtataccggtttttgtaatgaacgggtacaccactctctctaagaacatctttt 2160
Query: 61 tggatatattcaaaatcttagtagagggcgagactattgatgatcaaggtcaatcaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 tggatatattcaaaatcttagtagagggcgagactattgatgatcaaggtcaatcaaatt 2220
Query: 121 attgggataatcgaattgacttgcaaatggacaggctttcaaaatatttcaagaaaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 attgggataatcgaattgacttgcaaatggacaggctttcaaaatatttcaagaaaagac 2280
Query: 181 ctcytacggtgaagatgattcttttgatacataacttggacggtccgtcattccggagag 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 ctcctacggtgaagatgattcttttgatacataacttggacggtccgtcattccggagag 2340
Query: 241 aacattttcaaaccagaatgagtattcttgcacaaatcaaacaaatctgtgtcgtagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 aacattttcaaaccagaatgagtattcttgcacaaatcaaacaaatctgtgtcgtagcaa 2400
Query: 301 gtgtcgaccatatacaagctcctttcctttgggatcatttcagagctcaatcattcaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gtgtcgaccatatacaagctcctttcctttgggatcatttcagagctcaatcattcaact 2460
Query: 361 ttgtttaccacgatatcacaaattttgagccgtacatcgtagaaacagtacaaaccgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ttgtttaccacgatatcacaaattttgagccgtacatcgtagaaacagtacaaaccgata 2520
Query: 421 atgctatcgacttttccaaagattcaggtaccttgtttaatgcgaacggtgctaaatacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 atgctatcgacttttccaaagattcaggtaccttgtttaatgcgaacggtgctaaatacg 2580
Query: 481 tactagaatccctgacggacaattctaaaagaatgtacaamattcttcttcaacttctaa 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2581 tactagaatccctgacggacaattctaaaagaatgtacaaaattcttcttcaacttctaa 2640
Query: 541 tgggacagattaatgccaagaacgagtcaaagcctcgtgcaaaatctagttccttaaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 tgggacagattaatgccaagaacgagtcaaagcctcgtgcaaaatctagttccttaaaca 2700
Query: 601 aaatcacacctgggattgagttctctgaactttttaaaacatgcaccgaacagttcgtag 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2701 aaatcacacctgggattgagttctctgaactttttcaaacatgcaccgaacagttcgtag 2760
Query: 661 tctcgagsgaaatgggkcttcgaaccatcstatcagagttcattgatcataagatgggtg 720
||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 2761 tctcgagcgaaatgggtcttcgaaccatcctatcagagttcattgatcataagatggctg 2820
Query: 721 tcaatacgaaaaataaaatggg 742
||||||||||||||||||||||
Sbjct: 2821 tcaatacgaaaaataaaatggg 2842
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5915
Number of Sequences: 1807
Number of extensions: 5915
Number of successful extensions: 124
Number of sequences better than 1.0e-20: 1
length of query: 742
length of database: 10,358,551
effective HSP length: 16
effective length of query: 726
effective length of database: 10,329,639
effective search space: 7499317914
effective search space used: 7499317914
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)